BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023A09SP1|AL427990
(869 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1655 1603 0.0
>3x_Contig1655
Length = 16228
Score = 1603 bits (806), Expect = 0.0
Identities = 858/870 (98%), Gaps = 6/870 (0%)
Strand = Plus / Plus
Query: 1 gatctgcgccttagatacaagtcgctatccaccaatgaattatatgatgatgttatggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14135 gatctgcgccttagatacaagtcgctatccaccaatgaattatatgatgatgttatggaa 14194
Query: 61 cgtgttgaatttgtgcgtactattactcagctttctaccgatagtatgatcattttatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14195 cgtgttgaatttgtgcgtactattactcagctttctaccgatagtatgatcattttatta 14254
Query: 121 cggttatatggatggaacgaggaaaagctattagaggattatacagagaacccaagtgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14255 cggttatatggatggaacgaggaaaagctattagaggattatacagagaacccaagtgag 14314
Query: 181 attcttgagaaaggtgggcttatagtgccggagcactgtaagaagagagatttgacagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14315 attcttgagaaaggtgggcttatagtgccggagcactgtaagaagagagatttgacagat 14374
Query: 241 aaacctcattatacatgcctcatctgttgcgacagctacagcaaagtaccggtttttagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14375 aaacctcattatacatgcctcatctgttgcgacagctacagcaaagtaccggtttttagg 14434
Query: 301 atggagtgtgggcatgaggcgtgtatcaattgctatagaacatatttgacttcca-cttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 14435 atggagtgtgggcatgaggcgtgtatcaattgctatagaacatatttgacttccagcttt 14494
Query: 360 gaagaagc-ctaaggcaccaacctgtatgagttgccatttatctattacttctagtgata 418
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14495 gaagaagcgctaaggcaccaacctgtatgagttgccatttatctattacttctagtgata 14554
Query: 419 ttgaccgaatattcggaaataaagagttcagcaagaagcatatttgtctatcctttgaga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14555 ttgaccgaatattcggaaataaagagttcagcaagaagcatatttgtctatcctttgaga 14614
Query: 479 cgtttattaataagcattccaaaaactacaaatggtgtccctatacaggttgcggtaaca 538
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 14615 cgtttattgataagcattccaaaaactacaaatggtgt-cctatacaggttgcggtaaca 14673
Query: 539 tcatatattctaacaacgagtctacattgaacgaaatgttgaagcgacataagatacccg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14674 tcatatattctaacaacgagtctacattgaacgaaatgttgaagcgacataagatacccg 14733
Query: 599 aagttgaatgtagcaataaacacgcgttttgtttttactgttccacagaagtacacactc 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14734 aagttgaatgtagcaataaacacgcgttttgtttttactgttccacagaagtacacactc 14793
Query: 659 cgagcgattgtaaaattgcacaatatttggattcaaaaggttagagatgaatcaacngaw 718
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 14794 cgagcgattgtaaaattgcacaata-ttggattcaaaaggttagagatgaatcaac-gaa 14851
Query: 719 tttaawttggatattaaacaacaccaagccatgcccgttctgcggtactagtatagagaa 778
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14852 tttaaattggatattaaacaacaccaagccatgcccgttctgcggtactagtatagagaa 14911
Query: 779 aaacggrggttgcaaccatatgacatgtcagagctgccattccgagtttggttggatttg 838
|||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 14912 aaacggaggttgcaaccatatgacatgtcagagctgccattccgagttttgttggatttg 14971
Query: 839 cgatgggaagtggg-cawacataccgacaa 867
|||||||||||||| || ||||||||||||
Sbjct: 14972 cgatgggaagtgggccatacataccgacaa 15001
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5488
Number of Sequences: 1807
Number of extensions: 5488
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 869
length of database: 10,358,551
effective HSP length: 16
effective length of query: 853
effective length of database: 10,329,639
effective search space: 8811182067
effective search space used: 8811182067
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)